de.unihalle.informatik.MiToBo.imageJ.plugins.cellCounter.datatypes

Class CellCntrMarkerShape

java.lang.Object

de.unihalle.informatik.MiToBo.imageJ.plugins.cellCounter.datatypes.CellCntrMarkerShape

Direct Known Subclasses:

CellCntrMarkerShapeCurve, CellCntrMarkerShapeLine, CellCntrMarkerShapePolygon, CellCntrMarkerShapeRegion

public abstract class CellCntrMarkerShape
extends Object

Class to represent the geometric shape of a single marker in the image.

In the MTB Cell Counter in addition to a position a marker also owns a shape, e.g., a region contour.

Author:

Birgit Moeller

Field Summary

Fields

Modifier and Type	Field and Description
protected double	avgIntensity Average intensity of all shape pixels.
protected MTBBorder2D	mBorder Border of the object.

Constructor Summary

Constructors

Constructor and Description
CellCntrMarkerShape()

Method Summary

Modifier and Type	Method and Description
abstract double	getArea() Get area of the shape.
double	getAvgIntensity() Get average intensity.
MTBBorder2D	getOutline() Get outline of shape.
void	setAvgIntensity(double ai) Set average region intensity.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

mBorder

protected MTBBorder2D mBorder

Border of the object.

avgIntensity

protected double avgIntensity

Average intensity of all shape pixels.

Constructor Detail

CellCntrMarkerShape

public CellCntrMarkerShape()

Method Detail

getOutline

public MTBBorder2D getOutline()

Get outline of shape.

Returns:

Outline of shape, null if not available.

getArea

public abstract double getArea()

Get area of the shape.

Returns:

Size of shape area.

setAvgIntensity

public void setAvgIntensity(double ai)

Set average region intensity.

Parameters:

ai - Average intensity.

getAvgIntensity

public double getAvgIntensity()

Get average intensity.

Returns:

Average intensity, -1 if not available.